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Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone

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Zeitschriftentitel: Applications in Plant Sciences
Personen und Körperschaften: Forrest, Cairo N., Roberts, David G., Denham, Andrew J., Ayre, David J.
In: Applications in Plant Sciences, 3, 2015, 4
Format: E-Article
Sprache: Englisch
veröffentlicht:
Wiley
Schlagwörter:
Plant Science
Ecology, Evolution, Behavior and Systematics
author_facet Forrest, Cairo N.
Roberts, David G.
Denham, Andrew J.
Ayre, David J.
Forrest, Cairo N.
Roberts, David G.
Denham, Andrew J.
Ayre, David J.
author Forrest, Cairo N.
Roberts, David G.
Denham, Andrew J.
Ayre, David J.
spellingShingle Forrest, Cairo N.
Roberts, David G.
Denham, Andrew J.
Ayre, David J.
Applications in Plant Sciences
Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
Plant Science
Ecology, Evolution, Behavior and Systematics
author_sort forrest, cairo n.
spelling Forrest, Cairo N. Roberts, David G. Denham, Andrew J. Ayre, David J. 2168-0450 2168-0450 Wiley Plant Science Ecology, Evolution, Behavior and Systematics http://dx.doi.org/10.3732/apps.1400121 <jats:sec><jats:title>Premise of the study:</jats:title><jats:p>Microsatellite markers were developed for the common arid Australian shrub <jats:italic>Acacia ligulata</jats:italic> (Fabaceae) and the threatened overstory trees <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. pendula</jats:italic>.</jats:p></jats:sec><jats:sec><jats:title>Methods and Results:</jats:title><jats:p>DNA sequence data generated by 454 sequencing were used to identify microsatellite nucleotide repeat motifs. Including previously developed primer sets, we report on the development of 10 polymorphic microsatellite loci for each species. Six of these were novel for <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. ligulata</jats:italic>, and five were novel for <jats:italic>A. pendula</jats:italic>, while five more each were transferred from primers developed for related species (<jats:italic>A. carneorum</jats:italic> and <jats:italic>A. loderi</jats:italic>). We found three to 17 alleles per locus for each species, with high multilocus genotypic diversity within each of two <jats:italic>A. ligulata</jats:italic> and <jats:italic>A. pendula</jats:italic> stands, and one <jats:italic>A. melvillei</jats:italic> population. A second <jats:italic>A. melvillei</jats:italic> stand appeared to be monoclonal.</jats:p></jats:sec><jats:sec><jats:title>Conclusions:</jats:title><jats:p>These markers will allow assessment of population genetics, mating systems, and connectedness of populations of these and possibly other arid‐zone acacias.</jats:p></jats:sec> Microsatellite primers for vulnerable and thriving <i>Acacia</i> (Fabaceae) species from Australia's arid zone Applications in Plant Sciences
doi_str_mv 10.3732/apps.1400121
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title Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_unstemmed Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_full Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_fullStr Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_full_unstemmed Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_short Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_sort microsatellite primers for vulnerable and thriving <i>acacia</i> (fabaceae) species from australia's arid zone
topic Plant Science
Ecology, Evolution, Behavior and Systematics
url http://dx.doi.org/10.3732/apps.1400121
publishDate 2015
physical
description <jats:sec><jats:title>Premise of the study:</jats:title><jats:p>Microsatellite markers were developed for the common arid Australian shrub <jats:italic>Acacia ligulata</jats:italic> (Fabaceae) and the threatened overstory trees <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. pendula</jats:italic>.</jats:p></jats:sec><jats:sec><jats:title>Methods and Results:</jats:title><jats:p>DNA sequence data generated by 454 sequencing were used to identify microsatellite nucleotide repeat motifs. Including previously developed primer sets, we report on the development of 10 polymorphic microsatellite loci for each species. Six of these were novel for <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. ligulata</jats:italic>, and five were novel for <jats:italic>A. pendula</jats:italic>, while five more each were transferred from primers developed for related species (<jats:italic>A. carneorum</jats:italic> and <jats:italic>A. loderi</jats:italic>). We found three to 17 alleles per locus for each species, with high multilocus genotypic diversity within each of two <jats:italic>A. ligulata</jats:italic> and <jats:italic>A. pendula</jats:italic> stands, and one <jats:italic>A. melvillei</jats:italic> population. A second <jats:italic>A. melvillei</jats:italic> stand appeared to be monoclonal.</jats:p></jats:sec><jats:sec><jats:title>Conclusions:</jats:title><jats:p>These markers will allow assessment of population genetics, mating systems, and connectedness of populations of these and possibly other arid‐zone acacias.</jats:p></jats:sec>
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author Forrest, Cairo N., Roberts, David G., Denham, Andrew J., Ayre, David J.
author_facet Forrest, Cairo N., Roberts, David G., Denham, Andrew J., Ayre, David J., Forrest, Cairo N., Roberts, David G., Denham, Andrew J., Ayre, David J.
author_sort forrest, cairo n.
container_issue 4
container_start_page 0
container_title Applications in Plant Sciences
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description <jats:sec><jats:title>Premise of the study:</jats:title><jats:p>Microsatellite markers were developed for the common arid Australian shrub <jats:italic>Acacia ligulata</jats:italic> (Fabaceae) and the threatened overstory trees <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. pendula</jats:italic>.</jats:p></jats:sec><jats:sec><jats:title>Methods and Results:</jats:title><jats:p>DNA sequence data generated by 454 sequencing were used to identify microsatellite nucleotide repeat motifs. Including previously developed primer sets, we report on the development of 10 polymorphic microsatellite loci for each species. Six of these were novel for <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. ligulata</jats:italic>, and five were novel for <jats:italic>A. pendula</jats:italic>, while five more each were transferred from primers developed for related species (<jats:italic>A. carneorum</jats:italic> and <jats:italic>A. loderi</jats:italic>). We found three to 17 alleles per locus for each species, with high multilocus genotypic diversity within each of two <jats:italic>A. ligulata</jats:italic> and <jats:italic>A. pendula</jats:italic> stands, and one <jats:italic>A. melvillei</jats:italic> population. A second <jats:italic>A. melvillei</jats:italic> stand appeared to be monoclonal.</jats:p></jats:sec><jats:sec><jats:title>Conclusions:</jats:title><jats:p>These markers will allow assessment of population genetics, mating systems, and connectedness of populations of these and possibly other arid‐zone acacias.</jats:p></jats:sec>
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spelling Forrest, Cairo N. Roberts, David G. Denham, Andrew J. Ayre, David J. 2168-0450 2168-0450 Wiley Plant Science Ecology, Evolution, Behavior and Systematics http://dx.doi.org/10.3732/apps.1400121 <jats:sec><jats:title>Premise of the study:</jats:title><jats:p>Microsatellite markers were developed for the common arid Australian shrub <jats:italic>Acacia ligulata</jats:italic> (Fabaceae) and the threatened overstory trees <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. pendula</jats:italic>.</jats:p></jats:sec><jats:sec><jats:title>Methods and Results:</jats:title><jats:p>DNA sequence data generated by 454 sequencing were used to identify microsatellite nucleotide repeat motifs. Including previously developed primer sets, we report on the development of 10 polymorphic microsatellite loci for each species. Six of these were novel for <jats:italic>A. melvillei</jats:italic> and <jats:italic>A. ligulata</jats:italic>, and five were novel for <jats:italic>A. pendula</jats:italic>, while five more each were transferred from primers developed for related species (<jats:italic>A. carneorum</jats:italic> and <jats:italic>A. loderi</jats:italic>). We found three to 17 alleles per locus for each species, with high multilocus genotypic diversity within each of two <jats:italic>A. ligulata</jats:italic> and <jats:italic>A. pendula</jats:italic> stands, and one <jats:italic>A. melvillei</jats:italic> population. A second <jats:italic>A. melvillei</jats:italic> stand appeared to be monoclonal.</jats:p></jats:sec><jats:sec><jats:title>Conclusions:</jats:title><jats:p>These markers will allow assessment of population genetics, mating systems, and connectedness of populations of these and possibly other arid‐zone acacias.</jats:p></jats:sec> Microsatellite primers for vulnerable and thriving <i>Acacia</i> (Fabaceae) species from Australia's arid zone Applications in Plant Sciences
spellingShingle Forrest, Cairo N., Roberts, David G., Denham, Andrew J., Ayre, David J., Applications in Plant Sciences, Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone, Plant Science, Ecology, Evolution, Behavior and Systematics
title Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_full Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_fullStr Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_full_unstemmed Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_short Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
title_sort microsatellite primers for vulnerable and thriving <i>acacia</i> (fabaceae) species from australia's arid zone
title_unstemmed Microsatellite primers for vulnerable and thriving Acacia (Fabaceae) species from Australia's arid zone
topic Plant Science, Ecology, Evolution, Behavior and Systematics
url http://dx.doi.org/10.3732/apps.1400121