author_facet Prahalad, Sampath
Hansen, Sterling
Whiting, April
Guthery, Stephen L.
Clifford, Bronte
McNally, Bernadette
Zeft, Andrew S.
Bohnsack, John F.
Jorde, Lynn B.
Prahalad, Sampath
Hansen, Sterling
Whiting, April
Guthery, Stephen L.
Clifford, Bronte
McNally, Bernadette
Zeft, Andrew S.
Bohnsack, John F.
Jorde, Lynn B.
author Prahalad, Sampath
Hansen, Sterling
Whiting, April
Guthery, Stephen L.
Clifford, Bronte
McNally, Bernadette
Zeft, Andrew S.
Bohnsack, John F.
Jorde, Lynn B.
spellingShingle Prahalad, Sampath
Hansen, Sterling
Whiting, April
Guthery, Stephen L.
Clifford, Bronte
McNally, Bernadette
Zeft, Andrew S.
Bohnsack, John F.
Jorde, Lynn B.
Arthritis & Rheumatism
Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
Pharmacology (medical)
Immunology
Rheumatology
Immunology and Allergy
author_sort prahalad, sampath
spelling Prahalad, Sampath Hansen, Sterling Whiting, April Guthery, Stephen L. Clifford, Bronte McNally, Bernadette Zeft, Andrew S. Bohnsack, John F. Jorde, Lynn B. 0004-3591 1529-0131 Wiley Pharmacology (medical) Immunology Rheumatology Immunology and Allergy http://dx.doi.org/10.1002/art.24618 <jats:title>Abstract</jats:title><jats:sec><jats:title>Objective</jats:title><jats:p>Subtypes of juvenile idiopathic arthritis (JIA) share phenotypic features with other autoimmune disorders. We investigated several genetic variants associated with rheumatoid arthritis (RA) and other autoimmune disorders for association with JIA to test the hypothesis that clinically distinct phenotypes share common genetic susceptibility factors.</jats:p></jats:sec><jats:sec><jats:title>Methods</jats:title><jats:p>Cases were 445 children with JIA, and controls were 643 healthy adults. Using the TaqMan assay, subjects were genotyped for 8 single‐nucleotide polymorphisms in 7 loci including rs10499194 and rs6920220 in the <jats:italic>TNFAIP3</jats:italic> locus, rs6679677 in the <jats:italic>RSBN1</jats:italic> locus, rs17696736 in the <jats:italic>C12orf30</jats:italic> locus, rs3761847 in the <jats:italic>TRAF1</jats:italic>/<jats:italic>C5</jats:italic> locus, rs2104286 in the <jats:italic>IL2RA</jats:italic> locus, rs7574865 in the <jats:italic>STAT4</jats:italic> locus, and rs2542151 in the <jats:italic>PTPN2</jats:italic> locus. Alleles and genotypes were analyzed for association with JIA and JIA subtypes. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated.</jats:p></jats:sec><jats:sec><jats:title>Results</jats:title><jats:p>The strongest associations with JIA risk or protection were observed for <jats:italic>TNFAIP3</jats:italic> variants rs10499194 (OR 0.74 [95% CI 0.61–0.91], <jats:italic>P</jats:italic> &lt; 0.004) and rs6920220 (OR 1.30 [95% CI 1.05–1.61], <jats:italic>P</jats:italic> = 0.015). We also observed associations between JIA and both <jats:italic>STAT4</jats:italic> (OR 1.24 [95% CI 1.02–1.51], <jats:italic>P</jats:italic> = 0.029) and <jats:italic>C12orf30</jats:italic> (OR 1.20 [95% CI 1.01–1.43], <jats:italic>P</jats:italic> = 0.041) variants. The <jats:italic>PTPN2</jats:italic> variant rs2542151 deviated from Hardy‐Weinberg equilibrium and was excluded from analyses. Variants in <jats:italic>IL2RA</jats:italic>, <jats:italic>TRAF1/C5</jats:italic>, and <jats:italic>RSBN1</jats:italic> were not associated with JIA. After stratification by JIA subtype, the <jats:italic>TNFAIP3</jats:italic> and <jats:italic>C12orf30</jats:italic> variants were associated with oligoarticular JIA, while the <jats:italic>STAT4</jats:italic> variant was associated primarily with polyarticular JIA.</jats:p></jats:sec><jats:sec><jats:title>Conclusion</jats:title><jats:p>We have demonstrated associations between JIA and variants in the <jats:italic>TNFAIP3</jats:italic>, <jats:italic>STAT4</jats:italic>, and <jats:italic>C12orf30</jats:italic> regions that have previously shown associations with other autoimmune diseases, including RA and systemic lupus erythematosus. Our results suggest that clinically distinct autoimmune phenotypes share common genetic susceptibility factors.</jats:p></jats:sec> Variants in <i>TNFAIP3</i>, <i>STAT4</i>, and <i>C12orf30</i> loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis Arthritis & Rheumatism
doi_str_mv 10.1002/art.24618
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match_str prahalad2009variantsintnfaip3stat4andc12orf30lociassociatedwithmultipleautoimmunediseasesarealsoassociatedwithjuvenileidiopathicarthritis
publishDateSort 2009
publisher Wiley
recordtype ai
record_format ai
series Arthritis & Rheumatism
source_id 49
title Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_unstemmed Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_full Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_fullStr Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_full_unstemmed Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_short Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_sort variants in <i>tnfaip3</i>, <i>stat4</i>, and <i>c12orf30</i> loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
topic Pharmacology (medical)
Immunology
Rheumatology
Immunology and Allergy
url http://dx.doi.org/10.1002/art.24618
publishDate 2009
physical 2124-2130
description <jats:title>Abstract</jats:title><jats:sec><jats:title>Objective</jats:title><jats:p>Subtypes of juvenile idiopathic arthritis (JIA) share phenotypic features with other autoimmune disorders. We investigated several genetic variants associated with rheumatoid arthritis (RA) and other autoimmune disorders for association with JIA to test the hypothesis that clinically distinct phenotypes share common genetic susceptibility factors.</jats:p></jats:sec><jats:sec><jats:title>Methods</jats:title><jats:p>Cases were 445 children with JIA, and controls were 643 healthy adults. Using the TaqMan assay, subjects were genotyped for 8 single‐nucleotide polymorphisms in 7 loci including rs10499194 and rs6920220 in the <jats:italic>TNFAIP3</jats:italic> locus, rs6679677 in the <jats:italic>RSBN1</jats:italic> locus, rs17696736 in the <jats:italic>C12orf30</jats:italic> locus, rs3761847 in the <jats:italic>TRAF1</jats:italic>/<jats:italic>C5</jats:italic> locus, rs2104286 in the <jats:italic>IL2RA</jats:italic> locus, rs7574865 in the <jats:italic>STAT4</jats:italic> locus, and rs2542151 in the <jats:italic>PTPN2</jats:italic> locus. Alleles and genotypes were analyzed for association with JIA and JIA subtypes. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated.</jats:p></jats:sec><jats:sec><jats:title>Results</jats:title><jats:p>The strongest associations with JIA risk or protection were observed for <jats:italic>TNFAIP3</jats:italic> variants rs10499194 (OR 0.74 [95% CI 0.61–0.91], <jats:italic>P</jats:italic> &lt; 0.004) and rs6920220 (OR 1.30 [95% CI 1.05–1.61], <jats:italic>P</jats:italic> = 0.015). We also observed associations between JIA and both <jats:italic>STAT4</jats:italic> (OR 1.24 [95% CI 1.02–1.51], <jats:italic>P</jats:italic> = 0.029) and <jats:italic>C12orf30</jats:italic> (OR 1.20 [95% CI 1.01–1.43], <jats:italic>P</jats:italic> = 0.041) variants. The <jats:italic>PTPN2</jats:italic> variant rs2542151 deviated from Hardy‐Weinberg equilibrium and was excluded from analyses. Variants in <jats:italic>IL2RA</jats:italic>, <jats:italic>TRAF1/C5</jats:italic>, and <jats:italic>RSBN1</jats:italic> were not associated with JIA. After stratification by JIA subtype, the <jats:italic>TNFAIP3</jats:italic> and <jats:italic>C12orf30</jats:italic> variants were associated with oligoarticular JIA, while the <jats:italic>STAT4</jats:italic> variant was associated primarily with polyarticular JIA.</jats:p></jats:sec><jats:sec><jats:title>Conclusion</jats:title><jats:p>We have demonstrated associations between JIA and variants in the <jats:italic>TNFAIP3</jats:italic>, <jats:italic>STAT4</jats:italic>, and <jats:italic>C12orf30</jats:italic> regions that have previously shown associations with other autoimmune diseases, including RA and systemic lupus erythematosus. Our results suggest that clinically distinct autoimmune phenotypes share common genetic susceptibility factors.</jats:p></jats:sec>
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author Prahalad, Sampath, Hansen, Sterling, Whiting, April, Guthery, Stephen L., Clifford, Bronte, McNally, Bernadette, Zeft, Andrew S., Bohnsack, John F., Jorde, Lynn B.
author_facet Prahalad, Sampath, Hansen, Sterling, Whiting, April, Guthery, Stephen L., Clifford, Bronte, McNally, Bernadette, Zeft, Andrew S., Bohnsack, John F., Jorde, Lynn B., Prahalad, Sampath, Hansen, Sterling, Whiting, April, Guthery, Stephen L., Clifford, Bronte, McNally, Bernadette, Zeft, Andrew S., Bohnsack, John F., Jorde, Lynn B.
author_sort prahalad, sampath
container_issue 7
container_start_page 2124
container_title Arthritis & Rheumatism
container_volume 60
description <jats:title>Abstract</jats:title><jats:sec><jats:title>Objective</jats:title><jats:p>Subtypes of juvenile idiopathic arthritis (JIA) share phenotypic features with other autoimmune disorders. We investigated several genetic variants associated with rheumatoid arthritis (RA) and other autoimmune disorders for association with JIA to test the hypothesis that clinically distinct phenotypes share common genetic susceptibility factors.</jats:p></jats:sec><jats:sec><jats:title>Methods</jats:title><jats:p>Cases were 445 children with JIA, and controls were 643 healthy adults. Using the TaqMan assay, subjects were genotyped for 8 single‐nucleotide polymorphisms in 7 loci including rs10499194 and rs6920220 in the <jats:italic>TNFAIP3</jats:italic> locus, rs6679677 in the <jats:italic>RSBN1</jats:italic> locus, rs17696736 in the <jats:italic>C12orf30</jats:italic> locus, rs3761847 in the <jats:italic>TRAF1</jats:italic>/<jats:italic>C5</jats:italic> locus, rs2104286 in the <jats:italic>IL2RA</jats:italic> locus, rs7574865 in the <jats:italic>STAT4</jats:italic> locus, and rs2542151 in the <jats:italic>PTPN2</jats:italic> locus. Alleles and genotypes were analyzed for association with JIA and JIA subtypes. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated.</jats:p></jats:sec><jats:sec><jats:title>Results</jats:title><jats:p>The strongest associations with JIA risk or protection were observed for <jats:italic>TNFAIP3</jats:italic> variants rs10499194 (OR 0.74 [95% CI 0.61–0.91], <jats:italic>P</jats:italic> &lt; 0.004) and rs6920220 (OR 1.30 [95% CI 1.05–1.61], <jats:italic>P</jats:italic> = 0.015). We also observed associations between JIA and both <jats:italic>STAT4</jats:italic> (OR 1.24 [95% CI 1.02–1.51], <jats:italic>P</jats:italic> = 0.029) and <jats:italic>C12orf30</jats:italic> (OR 1.20 [95% CI 1.01–1.43], <jats:italic>P</jats:italic> = 0.041) variants. The <jats:italic>PTPN2</jats:italic> variant rs2542151 deviated from Hardy‐Weinberg equilibrium and was excluded from analyses. Variants in <jats:italic>IL2RA</jats:italic>, <jats:italic>TRAF1/C5</jats:italic>, and <jats:italic>RSBN1</jats:italic> were not associated with JIA. After stratification by JIA subtype, the <jats:italic>TNFAIP3</jats:italic> and <jats:italic>C12orf30</jats:italic> variants were associated with oligoarticular JIA, while the <jats:italic>STAT4</jats:italic> variant was associated primarily with polyarticular JIA.</jats:p></jats:sec><jats:sec><jats:title>Conclusion</jats:title><jats:p>We have demonstrated associations between JIA and variants in the <jats:italic>TNFAIP3</jats:italic>, <jats:italic>STAT4</jats:italic>, and <jats:italic>C12orf30</jats:italic> regions that have previously shown associations with other autoimmune diseases, including RA and systemic lupus erythematosus. Our results suggest that clinically distinct autoimmune phenotypes share common genetic susceptibility factors.</jats:p></jats:sec>
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match_str prahalad2009variantsintnfaip3stat4andc12orf30lociassociatedwithmultipleautoimmunediseasesarealsoassociatedwithjuvenileidiopathicarthritis
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spelling Prahalad, Sampath Hansen, Sterling Whiting, April Guthery, Stephen L. Clifford, Bronte McNally, Bernadette Zeft, Andrew S. Bohnsack, John F. Jorde, Lynn B. 0004-3591 1529-0131 Wiley Pharmacology (medical) Immunology Rheumatology Immunology and Allergy http://dx.doi.org/10.1002/art.24618 <jats:title>Abstract</jats:title><jats:sec><jats:title>Objective</jats:title><jats:p>Subtypes of juvenile idiopathic arthritis (JIA) share phenotypic features with other autoimmune disorders. We investigated several genetic variants associated with rheumatoid arthritis (RA) and other autoimmune disorders for association with JIA to test the hypothesis that clinically distinct phenotypes share common genetic susceptibility factors.</jats:p></jats:sec><jats:sec><jats:title>Methods</jats:title><jats:p>Cases were 445 children with JIA, and controls were 643 healthy adults. Using the TaqMan assay, subjects were genotyped for 8 single‐nucleotide polymorphisms in 7 loci including rs10499194 and rs6920220 in the <jats:italic>TNFAIP3</jats:italic> locus, rs6679677 in the <jats:italic>RSBN1</jats:italic> locus, rs17696736 in the <jats:italic>C12orf30</jats:italic> locus, rs3761847 in the <jats:italic>TRAF1</jats:italic>/<jats:italic>C5</jats:italic> locus, rs2104286 in the <jats:italic>IL2RA</jats:italic> locus, rs7574865 in the <jats:italic>STAT4</jats:italic> locus, and rs2542151 in the <jats:italic>PTPN2</jats:italic> locus. Alleles and genotypes were analyzed for association with JIA and JIA subtypes. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated.</jats:p></jats:sec><jats:sec><jats:title>Results</jats:title><jats:p>The strongest associations with JIA risk or protection were observed for <jats:italic>TNFAIP3</jats:italic> variants rs10499194 (OR 0.74 [95% CI 0.61–0.91], <jats:italic>P</jats:italic> &lt; 0.004) and rs6920220 (OR 1.30 [95% CI 1.05–1.61], <jats:italic>P</jats:italic> = 0.015). We also observed associations between JIA and both <jats:italic>STAT4</jats:italic> (OR 1.24 [95% CI 1.02–1.51], <jats:italic>P</jats:italic> = 0.029) and <jats:italic>C12orf30</jats:italic> (OR 1.20 [95% CI 1.01–1.43], <jats:italic>P</jats:italic> = 0.041) variants. The <jats:italic>PTPN2</jats:italic> variant rs2542151 deviated from Hardy‐Weinberg equilibrium and was excluded from analyses. Variants in <jats:italic>IL2RA</jats:italic>, <jats:italic>TRAF1/C5</jats:italic>, and <jats:italic>RSBN1</jats:italic> were not associated with JIA. After stratification by JIA subtype, the <jats:italic>TNFAIP3</jats:italic> and <jats:italic>C12orf30</jats:italic> variants were associated with oligoarticular JIA, while the <jats:italic>STAT4</jats:italic> variant was associated primarily with polyarticular JIA.</jats:p></jats:sec><jats:sec><jats:title>Conclusion</jats:title><jats:p>We have demonstrated associations between JIA and variants in the <jats:italic>TNFAIP3</jats:italic>, <jats:italic>STAT4</jats:italic>, and <jats:italic>C12orf30</jats:italic> regions that have previously shown associations with other autoimmune diseases, including RA and systemic lupus erythematosus. Our results suggest that clinically distinct autoimmune phenotypes share common genetic susceptibility factors.</jats:p></jats:sec> Variants in <i>TNFAIP3</i>, <i>STAT4</i>, and <i>C12orf30</i> loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis Arthritis & Rheumatism
spellingShingle Prahalad, Sampath, Hansen, Sterling, Whiting, April, Guthery, Stephen L., Clifford, Bronte, McNally, Bernadette, Zeft, Andrew S., Bohnsack, John F., Jorde, Lynn B., Arthritis & Rheumatism, Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis, Pharmacology (medical), Immunology, Rheumatology, Immunology and Allergy
title Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_full Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_fullStr Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_full_unstemmed Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_short Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_sort variants in <i>tnfaip3</i>, <i>stat4</i>, and <i>c12orf30</i> loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
title_unstemmed Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis
topic Pharmacology (medical), Immunology, Rheumatology, Immunology and Allergy
url http://dx.doi.org/10.1002/art.24618